Tutorial execution status

This page shows the current static tutorial copies that are published in the docs. Each tutorial page should expose the same metadata in a visible status block near the top.

• Generated at: 2026-03-27 10:20 UTC

• Published tutorials tracked: 11

What this means

• Last run date (UTC) is the latest recorded execution time embedded in the published notebook.

• Artifact check is the result recorded when the notebook was prepared for publication.

• These pages are static documentation copies, not interactive runtime sessions.

Main research task: annotation

Tutorial	Last run date (UTC)	Publication mode	Artifact check	Docs page
Human-pancreas annotation quickstart	2026-03-27 10:18 UTC	static executed tutorial	passed	open

• Human-pancreas annotation quickstart source: examples/scgpt_human_pancreas_annotation.ipynb; published at 2026-03-27 10:18 UTC; profile published

Supporting workflows

Tutorial	Last run date (UTC)	Publication mode	Artifact check	Docs page
Scanpy PBMC quickstart	2026-03-27 09:22 UTC	static executed tutorial	passed	open
Downstream Scanpy after scDLKit	2026-03-27 09:23 UTC	static executed tutorial	passed	open
PBMC model comparison	2026-03-27 09:24 UTC	static executed tutorial	passed	open

• Scanpy PBMC quickstart source: examples/train_vae_pbmc.ipynb; published at 2026-03-27 09:22 UTC; profile published

• Downstream Scanpy after scDLKit source: examples/downstream_scanpy_after_scdlkit.ipynb; published at 2026-03-27 09:23 UTC; profile published

• PBMC model comparison source: examples/compare_models_pbmc.ipynb; published at 2026-03-27 09:24 UTC; profile published

Advanced / appendix workflows

Tutorial	Last run date (UTC)	Publication mode	Artifact check	Docs page
Reconstruction sanity check	2026-03-27 09:24 UTC	static executed tutorial	passed	open
PBMC classification	2026-03-27 09:24 UTC	static executed tutorial	passed	open
Custom model extension	2026-03-27 09:25 UTC	static executed tutorial	passed	open
Experimental scGPT PBMC embeddings	2026-03-27 09:23 UTC	static executed tutorial	passed	open

• Reconstruction sanity check source: examples/reconstruction_sanity_pbmc.ipynb; published at 2026-03-27 09:24 UTC; profile published

• PBMC classification source: examples/classification_demo.ipynb; published at 2026-03-27 09:24 UTC; profile published

• Custom model extension source: examples/custom_model_extension.ipynb; published at 2026-03-27 09:25 UTC; profile published

• Experimental scGPT PBMC embeddings source: examples/scgpt_pbmc_embeddings.ipynb; published at 2026-03-27 09:23 UTC; profile published

Experimental detail appendix

Tutorial	Last run date (UTC)	Publication mode	Artifact check	Docs page
Experimental scGPT cell-type annotation	2026-03-27 09:22 UTC	static executed tutorial	passed	open
Experimental scGPT dataset-specific annotation	2026-03-27 09:22 UTC	static executed tutorial	passed	open

• Experimental scGPT cell-type annotation source: examples/scgpt_cell_type_annotation.ipynb; published at 2026-03-27 09:22 UTC; profile published

• Experimental scGPT dataset-specific annotation source: examples/scgpt_dataset_specific_annotation.ipynb; published at 2026-03-27 09:22 UTC; profile published

Maintainer / smoke only

Tutorial	Last run date (UTC)	Publication mode	Artifact check	Docs page
Synthetic smoke tutorial	2026-03-27 09:25 UTC	static executed tutorial	passed	open

• Synthetic smoke tutorial source: examples/first_run_synthetic.ipynb; published at 2026-03-27 09:25 UTC; profile published